Following two successful editions in 2021 and 2023, we are organizing the 3rd Workshop on Advances in Systems Immunology (ASI 2025) in conjunction with the 16th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2025), to be held on October 11-15 Philadelphia, PA (see the workshop website at https://asi.cs.ou.edu/ for more details).

The ASI workshop aims to bring together a diverse group of researchers to discuss the latest computational advances in systems immunology bridging computer science, artificial intelligence, statistics, immunology and medicine and highlighting breakthroughs in computational immunology and bioinformatics..

Submission Guidelines

The workshop features by-invitation talks based on submitted abstracts. To be invited, please submit a maximum 2-page abstract of your new research or highlights talk at

https://easychair.org/conferences/?conf=asi2025

List of Topics

Workshop topics of interest include but are not limited to:

• AI-driven drug discovery for immunological targets
• AI in Antibody Design
• Analysis of high-dimensional flow and mass cytometry data
• Analysis of pooled CRISPR genetic screens of immune cells
• BCR and TCR repertoire analysis
• Cancer Immunology
• Design and optimization of molecular and cellular immunotherapies
• Evolutionary immunology
• Immune cell atlases
• Immune cell type/state inference from single-cell omics
• Immune cell differentiation and lineage inference
• Inference of intra- and inter-cellular immune regulatory networks
• Integration of multi-omics single cell data
• Quantitative microscopy
• Modeling of antigen processing, presentation, and recognition
• Modeling and simulation of tumor-immune system interactions
• Modeling microbiome-immune systems interaction
• Spatial omics and the Tumor Microenvironment
• Vaccine design and optimization
• Viral immunology and host-pathogen interactions

Committees

Workshop Organizers:

Marmar Moussa (University of Oklahoma, marmar.moussa@ou.edu)

Ion Mandoiu (University of Connecticut, ion@engr.uconn.edu)

Wei Chen (University of Oklahoma, wei-r-chen@ou.edu)

Venue

The conference will be held in conjunction with the 16th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB 2025), to be held on October 11-15 Philadelphia, PA

Contact

All questions about submissions should be emailed to asi.immunology@gmail.com